NextGenBUG Homepage

18-Jan-2012: NOTE: This wiki has just been updated to use the latest version of dokuWiki, so if you have any problems editing the wiki then please email us at genepool-bioinformatics@ed.ac.uk

If you are not currently registered as a user on this wiki, and you wish to register as a user (which allows you to login to make changes to pages), then please send an email with your full name and preferred username to: genepool-bioinformatics@ed.ac.uk (Note: The “Login” button is at top right of this page.)

NextGen Sequencing Bioinformatics User Group

A Scotland-wide user group on bioinformatics for next-generation sequencing that meets once every two months to figure out the best ways of working with and making meaning of the massive amounts of data from ultra-high-throughput technologies such as Illumina Solexa, AB SOLiD, and Roche 454.

Supported by: The Gene Pool (The University of Edinburgh's Next Generation Genomics Facility) and The Scottish Bioinformatics Forum

To subscribe to the NextGenBUG mailing list (unmoderated), send an email to nextgenbug-archive+subscribe@googlegroups.com or visit http://groups.google.com/group/nextgenbug-archive

Twenty fifth meeting July 3, 2012 Roslin Institue, Edinburgh

suggested_speakers

Twenty fourth meeting May 2, 2012 Glasgow

Twenty-third meeting February 9, 2012, Dundee

Twenty-second meeting November 9, 2011, Edinburgh

Twenty-first meeting September 14, 2011, Edinburgh

Twentieth meeting July 12, 2011, Roslin Institute, Edinburgh

Nineteenth meeting May 10, 2011 Glasgow

Eighteenth meeting March 14, 2011 Edinburgh

Seventeenth meeting January 18, 2011 Dundee

Sixteenth meeting November 02, 2010 Edinburgh

Assembly workshop November 01-02, 2010 Edinburgh

Fifteenth meeting September 07, 2010 Glasgow

Fourteenth meeting June 01, 2010 Aberdeen

Thirteenth meeting April 06, 2010 Edinburgh

Twelfth meeting February 09, 2010 Dundee

Eleventh meeting December 01, 2009

Tenth meeting October 06, 2009

Ninth meeting August 04, 2009

Eighth meeting June 02, 2009

Seventh meeting April 7, 2009

Sixth meeting February 10, 2009

Fifth meeting December 2, 2008

Fourth meeting October 7, 2008

Third meeting August 5, 2008

Second meeting June 3, 2008

First meeting April 1, 2008

Links to other Next Gen sequencing resources, mailing lists, discussion forums, etc

Scripts for converting next gen sequencing data, quality control, automating analysis pipelines, etc

gff_parsing_group parsing gff files

understanding_newbler_outputs understanding outputs from the Newbler assembler for 454 data

Frequently Asked Questions